A machine learning repository for microbiome datasets
| Overview | |
|---|---|
| Description | Patients with normal, impaired, or type 2 diabetes glucose tolerance categories |
| Study design | Cross-Sectional |
| Topic area | Diabetes |
| Attributes | Classification: NGT, IGT, T2D |
| Dataset notes | |
| Number of samples | 144 |
| Number of subjects | 144 |
| Other Details | |
|---|---|
| 16s hypervariable region | NA |
| Targeted amplicon size | NA |
| Sequencing technology | Illumina HiSeq (shotgun) |
| Fraction of sequences mapped to database | |
| Processed sequences | karlsson2013.fasta.gz |
| Raw metadata file | mapping-orig.txt |
| Raw sequence source | http://www.ncbi.nlm.nih.gov/sra?term=ERP002469 |
| Literature source | https://www.ncbi.nlm.nih.gov/pubmed/23719380 |